Overview | Installation | Package Version | Naming Convention | Dataset Contents | Dataset Hierarchy
Package: covid19dbcand 0.1.1
Mohammed Ali
covid19dbcand: Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format
Provides different datasets parsed from 'Drugbank' <https://www.drugbank.ca/covid-19> database using 'dbparser' package. It is a smaller version from 'dbdataset' package. It contains only information about COVID-19 possible treatment.
Authors:
covid19dbcand_0.1.1.tar.gz
covid19dbcand_0.1.1.zip(r-4.7-any)covid19dbcand_0.1.1.zip(r-4.6-any)covid19dbcand_0.1.1.zip(r-4.5-any)
covid19dbcand_0.1.1.tgz(r-4.6-any)covid19dbcand_0.1.1.tgz(r-4.5-any)
covid19dbcand_0.1.1.tar.gz(r-4.7-any)covid19dbcand_0.1.1.tar.gz(r-4.6-any)
covid19dbcand_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
covid19dbcand/json (API)
| # Install 'covid19dbcand' in R: |
| install.packages('covid19dbcand', repos = c('https://interstellar-egypt.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mohammedfcis/covid19dbcand/issues
Datasets:
- Actions_Carrier_Drug - Drug Carriers/ Enzymes/ Targets/ Transporters related Actions
- Actions_Enzyme_Drug - Drug Carriers/ Enzymes/ Targets/ Transporters related Actions
- Actions_Target_Drug - Drug Carriers/ Enzymes/ Targets/ Transporters related Actions
- Actions_Transporter_Drug - Drug Carriers/ Enzymes/ Targets/ Transporters related Actions
- Affected_Organisms_Drug - Drug related Affected Organisms
- AHFS_Codes_Drug - The American Hospital Formulary Service (AHFS) identifier for Drugs
- Articles_Carrier_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Articles
- Articles_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Articles
- Articles_Enzyme_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Articles
- Articles_Target_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Articles
- Articles_Transporter_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Articles
- ATC_Codes_Drug - Drug related ATC Codes
- Attachments - Drugs/ Carriers/ Enzymes/ Targets/ Transporters Attachments
- Attachments_Carriers - Drugs/ Carriers/ Enzymes/ Targets/ Transporters Attachments
- Attachments_Enzymes - Drugs/ Carriers/ Enzymes/ Targets/ Transporters Attachments
- Attachments_Targets - Drugs/ Carriers/ Enzymes/ Targets/ Transporters Attachments
- Attachments_Transporters - Drugs/ Carriers/ Enzymes/ Targets/ Transporters Attachments
- Books_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Books
- Calculated_Properties_Drug - Drug Calculated Properties
- Carriers_Drug - Carriers/ Enzymes/ Targets/ Transporters
- Categories_Drug - Drug Categories General categorizations of the drug
- Classifications_Drug - Drug Classification
- Dosages_Drug - Drug Dosages A list of the commercially available dosages of the drug.
- Drugs - Drugs
- Drugs_Pathway_Drug - Pathway Drugs Pathway Drugs Each drug may have one or more pathway and vise versa
- Enzymes_Drug - Carriers/ Enzymes/ Targets/ Transporters
- Enzymes_Pathway_Drug - Pathway Enzymes Enzymes involved in this pathway.
- Enzymes_Reactions_Drug - Drug Reactions Enzymes Enzymes involved in metabolizing this drug.
- Experimental_Properties_Drug - Drug Experimental Properties
- External_Identifiers_Drug - External Identifiers for Drugs/ Carriers/ Enzymes/ Targets/ Transporters
- External_Identifiers_Polypeptide_Carrier_Drug - External Identifiers for Drugs/ Carriers/ Enzymes/ Targets/ Transporters
- External_Identifiers_Polypeptide_Enzyme_Drug - External Identifiers for Drugs/ Carriers/ Enzymes/ Targets/ Transporters
- External_Identifiers_Polypeptide_Target_Drug - External Identifiers for Drugs/ Carriers/ Enzymes/ Targets/ Transporters
- External_Identifiers_Transporter_Drug - External Identifiers for Drugs/ Carriers/ Enzymes/ Targets/ Transporters
- External_Links_Drug - Drugs External Links.
- Food_Interactions_Drug - Drug Food Interactions
- GO_Classifiers_Polypeptide_Carrier_Drug - Carriers/ Enzymes/ Targets/ Transporters related Gene Ontology
- GO_Classifiers_Polypeptide_Target_Drug - Carriers/ Enzymes/ Targets/ Transporters related Gene Ontology
- GO_Classifiers_Polypeptide_Transporter_Drug - Carriers/ Enzymes/ Targets/ Transporters related Gene Ontology
- GO_Classifiers_Polypeptides_Enzyme_Drug - Carriers/ Enzymes/ Targets/ Transporters related Gene Ontology
- Groups_Drug - Drug Groups
- Interactions_Drug - #' Drug Interactions
- International_Brands_Drug - Drug International Brands
- Links_Carrier_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Links
- Links_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Links
- Links_Enzyme_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Links
- Links_Target_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Links
- Links_Transporter_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Links
- Manufacturers_Drug - Drug Manufacturers
- Mixtures_Drug - Drug Mixture
- Packagers_Drug - Drug Packagers
- Patents_Drug - Drug Patent
- Pathways_Drug - Drug Pathways
- PDB_Entries_Drug - Drug PDB Entries
- PFAMS_Polypeptid_Transporter_Drug - PFAMs
- PFAMS_Polypeptide_Carrier_Drug - PFAMs
- PFAMS_Polypeptide_Target_Drug - PFAMs
- PFAMS_Polypeptides_Enzyme_Drug - PFAMs
- Pharmacology - Drug Pharmacology
- Polypeptide_Target_Drug - Polypeptide
- Polypeptides_Carrier_Drug - Polypeptide
- Polypeptides_Enzyme_Drug - Polypeptide
- Polypeptides_Transporter_Drug - Polypeptide
- Prices_Drug - Drug Prices
- Products_Drug - Drug Products
- Reactions_Drug - Drug Reactions
- Salts_Drug - Drug Salts
- Sequences_Drug - Drug Sequences
- SNP_Adverse_Drug_Reactions_Drug - SNP Adverse Drug Reactions
- SNP_Effects_Drug - Drug SNP Effects
- Synonyms_Drug - Drugs Synonyms
- Synonyms_Polypeptide_Carrier_Drug - Polypeptide Synonyms
- Synonyms_Polypeptide_Target_Drug - Polypeptide Synonyms
- Synonyms_Polypeptide_Transporter_Drug - Polypeptide Synonyms
- Synonyms_Polypeptides_Enzyme_Drug - Polypeptide Synonyms
- Targets_Drug - Carriers/ Enzymes/ Targets/ Transporters
- Textbooks_Carrier_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Books
- Textbooks_Enzyme_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Books
- Textbooks_Target_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Books
- Textbooks_Transporter_Drug - Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Books
- Transporters_Drug - Carriers/ Enzymes/ Targets/ Transporters
datasetdbparserdrugbankdrugbank-database
Last updated from:0d7ea2ee6d. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 138 | ||
| source / vignettes | OK | 184 | ||
| linux-release-x86_64 | OK | 119 | ||
| macos-release-arm64 | OK | 177 | ||
| macos-oldrel-arm64 | OK | 123 | ||
| windows-devel | OK | 96 | ||
| windows-release | OK | 75 | ||
| windows-oldrel | OK | 87 | ||
| wasm-release | OK | 100 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Drug Carriers/ Enzymes/ Targets/ Transporters related Actions | actions Actions_Carrier_Drug Actions_Enzyme_Drug Actions_Target_Drug Actions_Transporter_Drug |
| Drug related Affected Organisms | Affected_Organisms_Drug |
| The American Hospital Formulary Service (AHFS) identifier for Drugs | AHFS_Codes_Drug |
| Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Articles | articles Articles_Carrier_Drug Articles_Drug Articles_Enzyme_Drug Articles_Target_Drug Articles_Transporter_Drug |
| Drug related ATC Codes | ATC_Codes_Drug |
| Drugs/ Carriers/ Enzymes/ Targets/ Transporters Attachments | Attachments attachments Attachments_Carriers Attachments_Enzymes Attachments_Targets Attachments_Transporters |
| Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Books | books Books_Drug Textbooks_Carrier_Drug Textbooks_Enzyme_Drug Textbooks_Target_Drug Textbooks_Transporter_Drug |
| Drug Calculated Properties | Calculated_Properties_Drug |
| Drug Categories General categorizations of the drug | Categories_Drug |
| Carriers/ Enzymes/ Targets/ Transporters | Carriers_Drug cett Enzymes_Drug Targets_Drug Transporters_Drug |
| Drug Classification | Classifications_Drug |
| covid19dbcand: A data package that contains different datasets extracted from *DrugBank* xml database. | covid19dbcand |
| Drug Dosages A list of the commercially available dosages of the drug. | Dosages_Drug |
| Drugs | Drugs |
| Pathway Drugs Pathway Drugs Each drug may have one or more pathway and vise versa | Drugs_Pathway_Drug |
| Pathway Enzymes Enzymes involved in this pathway. | Enzymes_Pathway_Drug |
| Drug Reactions Enzymes Enzymes involved in metabolizing this drug. | Enzymes_Reactions_Drug |
| Drug Experimental Properties | Experimental_Properties_Drug |
| External Identifiers for Drugs/ Carriers/ Enzymes/ Targets/ Transporters | External_Identifiers_Drug External_Identifiers_Polypeptide_Carrier_Drug External_Identifiers_Polypeptide_Enzyme_Drug External_Identifiers_Polypeptide_Target_Drug External_Identifiers_Transporter_Drug ext_id |
| Drugs External Links. | External_Links_Drug |
| Drug Food Interactions | Food_Interactions_Drug |
| Carriers/ Enzymes/ Targets/ Transporters related Gene Ontology (GO) | go GO_Classifiers_Polypeptides_Enzyme_Drug GO_Classifiers_Polypeptide_Carrier_Drug GO_Classifiers_Polypeptide_Target_Drug GO_Classifiers_Polypeptide_Transporter_Drug |
| Drug Groups | Groups_Drug |
| #' Drug Interactions | Interactions_Drug |
| Drug International Brands | International_Brands_Drug |
| Drugs/ Carriers/ Enzymes/ Targets/ Transporters related Links | links Links_Carrier_Drug Links_Drug Links_Enzyme_Drug Links_Target_Drug Links_Transporter_Drug |
| Drug Manufacturers | Manufacturers_Drug |
| Drug Mixture | Mixtures_Drug |
| Drug Packagers | Packagers_Drug |
| Drug Patent | Patents_Drug |
| Drug Pathways | Pathways_Drug |
| Drug PDB Entries | PDB_Entries_Drug |
| PFAMs | pfam PFAMS_Polypeptides_Enzyme_Drug PFAMS_Polypeptide_Carrier_Drug PFAMS_Polypeptide_Target_Drug PFAMS_Polypeptid_Transporter_Drug |
| Drug Pharmacology | Pharmacology |
| Polypeptide Synonyms | poly_syn Synonyms_Polypeptides_Enzyme_Drug Synonyms_Polypeptide_Carrier_Drug Synonyms_Polypeptide_Target_Drug Synonyms_Polypeptide_Transporter_Drug |
| Polypeptide | polypeptide Polypeptides_Carrier_Drug Polypeptides_Enzyme_Drug Polypeptides_Transporter_Drug Polypeptide_Target_Drug |
| Drug Prices | Prices_Drug |
| Drug Products | Products_Drug |
| Drug Reactions | Reactions_Drug |
| Drug Salts | Salts_Drug |
| Drug Sequences | Sequences_Drug |
| SNP Adverse Drug Reactions | SNP_Adverse_Drug_Reactions_Drug |
| Drug SNP Effects | SNP_Effects_Drug |
| Drugs Synonyms | Synonyms_Drug |
